Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atf6F6VAN0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.42□□□□□ -0.58
Atf6F6VAN0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.42□□□□□ -0.58
Atf6F6VAN0 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.42□□□□□ -0.58
Atf6F6VAN0 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gm13611-201ENSMUST00000118269 318 ntBASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gm13408-201ENSMUST00000119822 798 ntBASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gm13935-201ENSMUST00000121859 798 ntBASIC11.42□□□□□ -0.58
Atf6F6VAN0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.42□□□□□ -0.58
Atf6F6VAN0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.42□□□□□ -0.58
Atf6F6VAN0 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.42□□□□□ -0.58
Atf6F6VAN0 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf6F6VAN0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.41□□□□□ -0.58
Atf6F6VAN0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Gm8302-201ENSMUST00000119217 852 ntBASIC11.41□□□□□ -0.58
Atf6F6VAN0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Gm37826-201ENSMUST00000195329 322 ntBASIC11.41□□□□□ -0.58
Atf6F6VAN0 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.41□□□□□ -0.58
Atf6F6VAN0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.41□□□□□ -0.58
Atf6F6VAN0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Atf6F6VAN0 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atf6F6VAN0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms