Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm9133-201ENSMUST00000118289 540 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm8754-201ENSMUST00000118391 520 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm16418-201ENSMUST00000118577 171 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 AC132833.1-202ENSMUST00000228875 1690 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm15720-201ENSMUST00000117133 282 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm6686-201ENSMUST00000178455 258 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm19058-201ENSMUST00000192135 598 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC9.54□□□□□ -0.88
Dchs1E9PVD3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm25154-201ENSMUST00000157123 119 ntBASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm45225-201ENSMUST00000206852 1139 ntBASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 AC165260.2-201ENSMUST00000225371 395 ntBASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm12377-201ENSMUST00000118656 252 ntBASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm18030-201ENSMUST00000222163 731 ntBASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gm10689-201ENSMUST00000098864 432 ntBASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Dchs1E9PVD3 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms