Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm8707-201ENSMUST00000183325 980 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Gm28746-201ENSMUST00000187453 380 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Gm6426-201ENSMUST00000209048 854 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Gm45363-201ENSMUST00000210196 1294 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Gm2716-201ENSMUST00000212350 643 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Gm10617-201ENSMUST00000098368 1172 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 A1cf-204ENSMUST00000224564 1432 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col4a6B1AVK5 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm13792-201ENSMUST00000121350 423 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm6439-201ENSMUST00000199849 862 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 AC153153.1-201ENSMUST00000225803 793 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 AC107711.3-201ENSMUST00000228939 1035 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm16477-201ENSMUST00000085365 801 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm17415-201ENSMUST00000096427 789 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm14571-201ENSMUST00000118292 570 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm21963-201ENSMUST00000179519 330 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm38103-201ENSMUST00000191707 864 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm19090-201ENSMUST00000218187 774 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm8615-201ENSMUST00000025307 771 ntBASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col4a6B1AVK5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 AA623943-201ENSMUST00000121794 354 ntBASIC11.19□□□□□ -0.62
Col4a6B1AVK5 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC11.19□□□□□ -0.62
Col4a6B1AVK5 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms