Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Mir326-201ENSMUST00000083637 95 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm25514-201ENSMUST00000083860 135 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Gm25288-201ENSMUST00000122800 265 ntBASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Gm9625-201ENSMUST00000180422 955 ntBASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Mir6387-201ENSMUST00000184042 108 ntBASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Gm19640-201ENSMUST00000214849 464 ntBASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn3aA2ASI5 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Gm23769-201ENSMUST00000104441 121 ntBASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Gm7928-201ENSMUST00000181249 701 ntBASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Gm8601-201ENSMUST00000182096 909 ntBASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn3aA2ASI5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Gm8152-201ENSMUST00000120842 637 ntBASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Gm13827-201ENSMUST00000148801 372 ntBASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn3aA2ASI5 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms