Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Gm45165-201ENSMUST00000207763 1631 ntBASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp4bQ9D8B3 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chmp4bQ9D8B3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Gm38140-201ENSMUST00000193617 2755 ntBASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Gm7642-201ENSMUST00000216345 1809 ntBASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp4bQ9D8B3 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Gm14592-201ENSMUST00000117201 560 ntBASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Gm17709-201ENSMUST00000174536 1096 ntBASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 AC155637.1-201ENSMUST00000218560 636 ntBASIC14□□□□□ -0.17
Chmp4bQ9D8B3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp4bQ9D8B3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms