Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 AC090962.2-201ENSMUST00000225064 1801 ntBASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm12389-201ENSMUST00000117696 418 ntBASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm14219-201ENSMUST00000120414 288 ntBASIC14.58□□□□□ -0.08
U2af1Q9D883 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.58□□□□□ -0.08
U2af1Q9D883 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm26976-201ENSMUST00000182929 908 ntBASIC14.58□□□□□ -0.08
U2af1Q9D883 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
U2af1Q9D883 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm8255-201ENSMUST00000218693 305 ntBASIC14.58□□□□□ -0.08
U2af1Q9D883 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
U2af1Q9D883 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
U2af1Q9D883 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
U2af1Q9D883 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
U2af1Q9D883 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Gm25053-201ENSMUST00000103982 133 ntBASIC14.57□□□□□ -0.08
U2af1Q9D883 Gm25922-201ENSMUST00000104281 130 ntBASIC14.57□□□□□ -0.08
U2af1Q9D883 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.57□□□□□ -0.08
U2af1Q9D883 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC14.57□□□□□ -0.08
U2af1Q9D883 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC14.57□□□□□ -0.08
U2af1Q9D883 Gm24679-201ENSMUST00000158762 111 ntBASIC14.57□□□□□ -0.08
U2af1Q9D883 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC14.57□□□□□ -0.08
U2af1Q9D883 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
U2af1Q9D883 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.57□□□□□ -0.08
U2af1Q9D883 Gm25053-202ENSMUST00000199731 132 ntBASIC14.57□□□□□ -0.08
U2af1Q9D883 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.57□□□□□ -0.08
U2af1Q9D883 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.57□□□□□ -0.08
U2af1Q9D883 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.57□□□□□ -0.08
U2af1Q9D883 AC158392.3-201ENSMUST00000224271 1284 ntBASIC14.57□□□□□ -0.08
U2af1Q9D883 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
U2af1Q9D883 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
U2af1Q9D883 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
U2af1Q9D883 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
U2af1Q9D883 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
U2af1Q9D883 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Gm25562-201ENSMUST00000104608 133 ntBASIC14.56□□□□□ -0.08
U2af1Q9D883 Gm12628-201ENSMUST00000122193 382 ntBASIC14.56□□□□□ -0.08
U2af1Q9D883 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
U2af1Q9D883 Gm24248-201ENSMUST00000157321 322 ntBASIC14.56□□□□□ -0.08
U2af1Q9D883 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Gm37365-201ENSMUST00000193109 409 ntBASIC14.56□□□□□ -0.08
U2af1Q9D883 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.56□□□□□ -0.08
U2af1Q9D883 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.56□□□□□ -0.08
U2af1Q9D883 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
U2af1Q9D883 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
U2af1Q9D883 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms