Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4Q99P72 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4Q99P72 Gm28533-202ENSMUST00000190106 1346 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtn4Q99P72 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4Q99P72 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn4Q99P72 Gm37536-201ENSMUST00000194710 2491 ntBASIC15.14■□□□□ 0.01
Rtn4Q99P72 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm44093-201ENSMUST00000204381 1802 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm7722-201ENSMUST00000120646 741 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm17061-201ENSMUST00000163167 499 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm8282-201ENSMUST00000187559 483 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm19124-201ENSMUST00000191041 832 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm44181-201ENSMUST00000203106 483 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm17827-201ENSMUST00000211825 742 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm18645-202ENSMUST00000212222 760 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 AC151904.2-201ENSMUST00000218683 1177 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm36957-201ENSMUST00000192982 2824 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.13■□□□□ 0.01
Rtn4Q99P72 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn4Q99P72 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm14103-201ENSMUST00000119075 366 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm5523-201ENSMUST00000180415 997 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm17798-201ENSMUST00000182282 1035 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm43962-201ENSMUST00000203898 190 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 Olfr471-201ENSMUST00000210091 936 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm7848-201ENSMUST00000210739 718 ntBASIC15.12■□□□□ 0.01
Rtn4Q99P72 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
Rtn4Q99P72 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms