Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm3828-201ENSMUST00000121817 257 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm23757-201ENSMUST00000158353 100 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Mir6387-201ENSMUST00000184042 108 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm45359-201ENSMUST00000210635 427 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm10020-201ENSMUST00000081993 612 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-1Q99MA9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.52□□□□□ -0.72
Nkx6-1Q99MA9 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Nkx6-1Q99MA9 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-1Q99MA9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-1Q99MA9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx6-1Q99MA9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm26313-201ENSMUST00000157770 308 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm25872-201ENSMUST00000177784 100 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm28923-201ENSMUST00000187755 322 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm29808-201ENSMUST00000194419 468 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm19918-201ENSMUST00000194858 400 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm44008-201ENSMUST00000204345 412 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm45310-201ENSMUST00000210436 275 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm18001-201ENSMUST00000212023 688 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms