Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.73□□□□□ -0.21
RtcbQ99LF4 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Gm15258-201ENSMUST00000153801 741 ntBASIC13.73□□□□□ -0.21
RtcbQ99LF4 Gm25394-201ENSMUST00000157338 133 ntBASIC13.73□□□□□ -0.21
RtcbQ99LF4 Gm26174-201ENSMUST00000158415 219 ntBASIC13.73□□□□□ -0.21
RtcbQ99LF4 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Platr10-202ENSMUST00000191479 818 ntBASIC13.73□□□□□ -0.21
RtcbQ99LF4 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm7405-201ENSMUST00000121476 1337 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm12736-201ENSMUST00000119330 236 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm13281-201ENSMUST00000120871 567 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm14006-201ENSMUST00000122132 981 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm26875-201ENSMUST00000181006 950 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm17944-201ENSMUST00000186351 643 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm29543-201ENSMUST00000188138 967 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm37858-201ENSMUST00000192759 1231 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm43002-201ENSMUST00000200310 155 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm45745-201ENSMUST00000211447 1180 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm3926-201ENSMUST00000223378 1123 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 BX649293.1-201ENSMUST00000227437 631 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 AC107711.4-201ENSMUST00000228948 440 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RtcbQ99LF4 Erich3-203ENSMUST00000189969 3460 ntBASIC13.72□□□□□ -0.21
RtcbQ99LF4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Gm13192-201ENSMUST00000101199 208 ntBASIC13.71□□□□□ -0.21
RtcbQ99LF4 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC13.71□□□□□ -0.21
RtcbQ99LF4 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC13.71□□□□□ -0.21
RtcbQ99LF4 Gm10443-201ENSMUST00000119024 210 ntBASIC13.71□□□□□ -0.21
RtcbQ99LF4 Gm13688-201ENSMUST00000121557 608 ntBASIC13.71□□□□□ -0.21
RtcbQ99LF4 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RtcbQ99LF4 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms