Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC12.89□□□□□ -0.35
StrcQ8VIM6 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 AC116797.2-203ENSMUST00000225290 565 ntBASIC12.89□□□□□ -0.35
StrcQ8VIM6 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.89□□□□□ -0.35
StrcQ8VIM6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
StrcQ8VIM6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm13543-201ENSMUST00000121230 796 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm17815-201ENSMUST00000198305 895 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm7924-201ENSMUST00000203975 785 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm43625-201ENSMUST00000199177 1539 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm11701-201ENSMUST00000121277 1142 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm38301-201ENSMUST00000195573 543 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 BC002189-201ENSMUST00000195674 598 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm18646-201ENSMUST00000212240 1063 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC12.88□□□□□ -0.35
StrcQ8VIM6 AC163351.1-201ENSMUST00000225539 737 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
StrcQ8VIM6 Gm4880-201ENSMUST00000207645 1696 ntBASIC12.87□□□□□ -0.35
StrcQ8VIM6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.87□□□□□ -0.35
StrcQ8VIM6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm38220-201ENSMUST00000195774 1447 ntBASIC12.87□□□□□ -0.35
StrcQ8VIM6 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.87□□□□□ -0.35
StrcQ8VIM6 AC130671.3-201ENSMUST00000227393 1897 ntBASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm7190-201ENSMUST00000118669 1452 ntBASIC12.87□□□□□ -0.35
StrcQ8VIM6 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm12011-201ENSMUST00000119734 618 ntBASIC12.87□□□□□ -0.35
StrcQ8VIM6 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm43833-201ENSMUST00000198828 293 ntBASIC12.87□□□□□ -0.35
StrcQ8VIM6 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm8991-201ENSMUST00000073014 1075 ntBASIC12.87□□□□□ -0.35
StrcQ8VIM6 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.87□□□□□ -0.35
StrcQ8VIM6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
StrcQ8VIM6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
StrcQ8VIM6 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
StrcQ8VIM6 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.86□□□□□ -0.35
StrcQ8VIM6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
StrcQ8VIM6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
StrcQ8VIM6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
StrcQ8VIM6 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
StrcQ8VIM6 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC12.86□□□□□ -0.35
StrcQ8VIM6 Gm4996-201ENSMUST00000122042 784 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms