Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm8618-201ENSMUST00000097570 432 ntBASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx54Q8K4L0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm42971-201ENSMUST00000199228 2079 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm5472-201ENSMUST00000178604 1678 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm15476-201ENSMUST00000118247 1191 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm5764-201ENSMUST00000118817 885 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm22763-201ENSMUST00000158374 107 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm6686-201ENSMUST00000178455 258 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm29164-201ENSMUST00000185454 1024 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm21156-201ENSMUST00000189693 869 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm38038-201ENSMUST00000193803 259 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm42599-201ENSMUST00000201308 469 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 CT025618.1-201ENSMUST00000227409 1279 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 AC163646.3-202ENSMUST00000228685 691 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx54Q8K4L0 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx54Q8K4L0 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Gm8615-201ENSMUST00000025307 771 ntBASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx54Q8K4L0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 AC154197.1-201ENSMUST00000225136 1382 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms