Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gm9550-201ENSMUST00000161130 862 ntBASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gm19459-201ENSMUST00000176240 835 ntBASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gm7467-201ENSMUST00000185173 652 ntBASIC10.48□□□□□ -0.73
Clrn1Q8K445 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gm37458-201ENSMUST00000194055 410 ntBASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.48□□□□□ -0.73
Clrn1Q8K445 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.48□□□□□ -0.73
Clrn1Q8K445 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm44323-201ENSMUST00000198689 129 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm43947-201ENSMUST00000203019 959 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.47□□□□□ -0.73
Clrn1Q8K445 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Clrn1Q8K445 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Clrn1Q8K445 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms