Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm13126-201ENSMUST00000117079 3063 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm15352-201ENSMUST00000118696 270 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm18056-201ENSMUST00000207670 568 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm18061-201ENSMUST00000208350 562 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm18063-201ENSMUST00000208529 568 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm18052-201ENSMUST00000208750 559 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 AC160340.2-201ENSMUST00000220812 3675 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc38Q8CDN8 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 AC131029.1-201ENSMUST00000226391 2929 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm15236-201ENSMUST00000117309 379 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm4909-201ENSMUST00000118749 794 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm16219-201ENSMUST00000120096 274 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm11836-201ENSMUST00000121022 441 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm37981-201ENSMUST00000194280 535 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc38Q8CDN8 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.4□□□□□ -0.43
Ccdc38Q8CDN8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.4□□□□□ -0.43
Ccdc38Q8CDN8 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc38Q8CDN8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc38Q8CDN8 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms