Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm5451-201ENSMUST00000080545 579 ntBASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Btrc-209ENSMUST00000224478 2194 ntBASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps53Q8CCB4 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Gm25766-201ENSMUST00000104101 131 ntBASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Gm12419-201ENSMUST00000116649 636 ntBASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Gm8342-201ENSMUST00000209839 757 ntBASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps53Q8CCB4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm8459-201ENSMUST00000162504 760 ntBASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm26134-201ENSMUST00000178484 110 ntBASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm6439-201ENSMUST00000199849 862 ntBASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.96□□□□□ -0.33
Vps53Q8CCB4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.96□□□□□ -0.34
Vps53Q8CCB4 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms