Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rad54bQ6PFE3 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rad54bQ6PFE3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rad54bQ6PFE3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rad54bQ6PFE3 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rad54bQ6PFE3 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.2□□□□□ -0.62
Rad54bQ6PFE3 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rad54bQ6PFE3 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rad54bQ6PFE3 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rad54bQ6PFE3 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm12419-201ENSMUST00000116649 636 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm15615-201ENSMUST00000118876 198 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm14395-201ENSMUST00000120494 563 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm7985-201ENSMUST00000183329 981 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm2260-201ENSMUST00000184965 657 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm7255-201ENSMUST00000187371 908 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Platr10-202ENSMUST00000191479 818 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm37981-201ENSMUST00000194280 535 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rad54bQ6PFE3 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms