Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm45663-201ENSMUST00000210429 1632 ntBASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup98Q6PFD9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm14006-201ENSMUST00000122132 981 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm26313-201ENSMUST00000157770 308 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Cog3-203ENSMUST00000227473 4197 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm23595-201ENSMUST00000104306 130 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm11411-201ENSMUST00000117951 719 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm17107-201ENSMUST00000170983 553 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm18466-201ENSMUST00000209147 499 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 AC154213.1-201ENSMUST00000228234 583 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.88□□□□□ -0.35
Nup98Q6PFD9 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nup98Q6PFD9 Gm45170-201ENSMUST00000206746 1671 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm8725-201ENSMUST00000221829 1333 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm2345-201ENSMUST00000193451 589 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm5040-201ENSMUST00000218609 800 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm5278-201ENSMUST00000055957 552 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup98Q6PFD9 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nup98Q6PFD9 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms