Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Gm42879-201ENSMUST00000198656 2214 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm11989-201ENSMUST00000117240 672 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm11362-201ENSMUST00000118838 850 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm11222-201ENSMUST00000119005 738 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Mir1896-201ENSMUST00000122641 81 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm7430-201ENSMUST00000193824 1144 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm18893-201ENSMUST00000198416 943 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm19187-201ENSMUST00000206781 892 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm32111-201ENSMUST00000207689 846 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Gm8712-201ENSMUST00000221090 701 ntBASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf220Q6PDX6 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm15547-201ENSMUST00000122152 333 ntBASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm18062-201ENSMUST00000208020 547 ntBASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm18055-201ENSMUST00000208254 547 ntBASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rnf220Q6PDX6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms