Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm29808-201ENSMUST00000194419 468 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm5865-201ENSMUST00000198713 637 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm18539-201ENSMUST00000204745 1090 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm45719-201ENSMUST00000207954 1662 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm42851-201ENSMUST00000201325 1411 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm10537-201ENSMUST00000192625 1698 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm23604-201ENSMUST00000104311 132 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm11411-201ENSMUST00000117951 719 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm14176-201ENSMUST00000121302 477 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm4705-201ENSMUST00000177415 354 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm43726-201ENSMUST00000199110 775 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Gm4778-201ENSMUST00000098878 1098 ntBASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd4Q6PDQ2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Gm43622-201ENSMUST00000200140 2019 ntBASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Gm8756-201ENSMUST00000183250 929 ntBASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 AC107752.1-201ENSMUST00000219362 469 ntBASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Pck2-205ENSMUST00000226352 2784 ntBASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC14.24□□□□□ -0.13
Chd4Q6PDQ2 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm15636-201ENSMUST00000119205 668 ntBASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm6612-201ENSMUST00000170777 395 ntBASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm29101-201ENSMUST00000188329 1471 ntBASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm23439-201ENSMUST00000104292 132 ntBASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm20091-201ENSMUST00000179683 189 ntBASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm37851-201ENSMUST00000193871 889 ntBASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm37944-201ENSMUST00000194233 414 ntBASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gm42803-201ENSMUST00000201051 451 ntBASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 AC139155.1-201ENSMUST00000226043 444 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms