Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcc2Q6PDG5 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Gm37284-201ENSMUST00000193607 539 ntBASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Gm37905-201ENSMUST00000195310 341 ntBASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Gm5468-202ENSMUST00000227851 682 ntBASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Smarcc2Q6PDG5 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcc2Q6PDG5 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms