Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ift88Q61371 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ift88Q61371 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ift88Q61371 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ift88Q61371 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.26□□□□□ -0.45
Ift88Q61371 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ift88Q61371 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ift88Q61371 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ift88Q61371 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ift88Q61371 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Gm14058-201ENSMUST00000116082 735 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 Gm22711-201ENSMUST00000116890 133 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 Gm9089-201ENSMUST00000122027 526 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 Gm23694-201ENSMUST00000179335 110 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 Gm29067-201ENSMUST00000190821 470 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.25□□□□□ -0.45
Ift88Q61371 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Ift88Q61371 Gm18212-201ENSMUST00000211678 889 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 Gm2517-201ENSMUST00000215651 348 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.25□□□□□ -0.45
Ift88Q61371 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC12.25□□□□□ -0.45
Ift88Q61371 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ift88Q61371 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ift88Q61371 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ift88Q61371 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Ift88Q61371 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift88Q61371 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ift88Q61371 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ift88Q61371 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ift88Q61371 Gm22920-201ENSMUST00000102175 109 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.24□□□□□ -0.45
Ift88Q61371 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.24□□□□□ -0.45
Ift88Q61371 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ift88Q61371 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Ift88Q61371 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.24□□□□□ -0.45
Ift88Q61371 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ift88Q61371 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Gm27552-201ENSMUST00000183351 62 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Gm27844-201ENSMUST00000183613 62 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Gm37284-201ENSMUST00000193607 539 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 AU022133-201ENSMUST00000200601 873 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.24□□□□□ -0.45
Ift88Q61371 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Gm6905-201ENSMUST00000205729 511 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Gm32111-201ENSMUST00000207689 846 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Gm5186-201ENSMUST00000218781 920 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Gm25125-201ENSMUST00000083340 136 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms