Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp48Q3V0C5 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp48Q3V0C5 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp48Q3V0C5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Usp48Q3V0C5 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp48Q3V0C5 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.83□□□□□ -0.2
Usp48Q3V0C5 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp48Q3V0C5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Erich3-203ENSMUST00000189969 3460 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm23612-201ENSMUST00000103823 110 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm16219-201ENSMUST00000120096 274 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm23576-201ENSMUST00000179918 110 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm43249-201ENSMUST00000200464 458 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm9487-201ENSMUST00000216600 472 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm4978-201ENSMUST00000071565 801 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp48Q3V0C5 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm14052-201ENSMUST00000121434 1031 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm15549-201ENSMUST00000121595 622 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm11993-201ENSMUST00000121861 820 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Mir432-201ENSMUST00000157230 75 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm6644-201ENSMUST00000186507 951 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm5982-201ENSMUST00000196234 512 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm7939-201ENSMUST00000201233 1050 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 BC080696-201ENSMUST00000202858 1218 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm2448-201ENSMUST00000207080 559 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.81□□□□□ -0.2
Usp48Q3V0C5 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Gm6158-201ENSMUST00000109467 904 ntBASIC13.8□□□□□ -0.2
Usp48Q3V0C5 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms