Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm12196-201ENSMUST00000120954 262 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Znf48Q3US17 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm8492-201ENSMUST00000182375 987 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm29354-201ENSMUST00000187613 696 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm34023-201ENSMUST00000195539 217 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 BB187690-201ENSMUST00000198619 1176 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.56□□□□□ -0.88
Znf48Q3US17 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Znf48Q3US17 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Znf48Q3US17 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Znf48Q3US17 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Znf48Q3US17 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm25880-201ENSMUST00000104331 132 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm26143-201ENSMUST00000104480 108 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm25317-201ENSMUST00000116824 129 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm11989-201ENSMUST00000117240 672 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm12314-201ENSMUST00000118104 538 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm11362-201ENSMUST00000118838 850 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm4540-201ENSMUST00000170669 429 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm20574-201ENSMUST00000182867 917 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm27390-201ENSMUST00000184516 176 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm33112-201ENSMUST00000193971 699 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm38233-201ENSMUST00000194259 807 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm4482-201ENSMUST00000200876 742 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm43962-201ENSMUST00000203898 190 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm6905-201ENSMUST00000205729 511 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm44636-201ENSMUST00000206130 755 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm9463-201ENSMUST00000206707 601 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm45398-201ENSMUST00000210561 165 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC9.55□□□□□ -0.88
Znf48Q3US17 AC134860.5-201ENSMUST00000225071 1249 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 AC116724.1-201ENSMUST00000227900 972 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 CT025523.1-201ENSMUST00000228318 694 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Znf48Q3US17 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC9.55□□□□□ -0.88
Znf48Q3US17 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Znf48Q3US17 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms