Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm17415-201ENSMUST00000096427 789 ntBASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gm8876-201ENSMUST00000120768 1122 ntBASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gm14148-201ENSMUST00000122433 1008 ntBASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 AC107711.3-201ENSMUST00000228939 1035 ntBASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b2Q3UJB0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Gm22763-201ENSMUST00000158374 107 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Gm38038-201ENSMUST00000193803 259 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Gm9353-201ENSMUST00000200472 604 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Gm42732-201ENSMUST00000202887 1197 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Gm44124-201ENSMUST00000204159 472 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Gm33080-201ENSMUST00000205429 172 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 AC164614.1-201ENSMUST00000216038 397 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 AC155300.1-201ENSMUST00000219134 480 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b2Q3UJB0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Gm19027-201ENSMUST00000187291 1355 ntBASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Gm12254-201ENSMUST00000134617 471 ntBASIC14.38□□□□□ -0.11
Sf3b2Q3UJB0 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms