Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm4996-201ENSMUST00000122042 784 ntBASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm9458-201ENSMUST00000135273 727 ntBASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm27953-201ENSMUST00000185171 143 ntBASIC10.22□□□□□ -0.77
Spg11Q3UHA3 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm42441-201ENSMUST00000199778 748 ntBASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Gm26132-201ENSMUST00000083166 148 ntBASIC10.22□□□□□ -0.77
Spg11Q3UHA3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Gm12529-201ENSMUST00000119529 268 ntBASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Gm28381-201ENSMUST00000188403 193 ntBASIC10.21□□□□□ -0.77
Spg11Q3UHA3 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Spg11Q3UHA3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Gm14853-201ENSMUST00000116081 549 ntBASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Gm5764-201ENSMUST00000118817 885 ntBASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Gm12464-201ENSMUST00000121385 1016 ntBASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Gm7539-201ENSMUST00000189789 630 ntBASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Spg11Q3UHA3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms