Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm17244-201ENSMUST00000192482 3416 ntBASIC8.64□□□□□ -1.03
Cdx4Q07424 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cdx4Q07424 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cdx4Q07424 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm44755-201ENSMUST00000207830 2102 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm38292-201ENSMUST00000192646 3045 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm22920-201ENSMUST00000102175 109 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm12579-201ENSMUST00000118040 783 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm8731-201ENSMUST00000118088 412 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm15725-201ENSMUST00000119947 1090 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm12407-201ENSMUST00000180219 324 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Ighv5-11-201ENSMUST00000193354 371 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm43186-201ENSMUST00000198130 824 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm6867-201ENSMUST00000219165 425 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Gm5879-201ENSMUST00000089501 1209 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.63□□□□□ -1.03
Cdx4Q07424 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
Cdx4Q07424 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cdx4Q07424 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Cdx4Q07424 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm42141-201ENSMUST00000196534 2172 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm14005-209ENSMUST00000224993 1832 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Cdx4Q07424 n-R5s64-201ENSMUST00000102019 119 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms