Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Lig3P97386 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lig3P97386 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.23□□□□□ -0.45
Lig3P97386 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Lig3P97386 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lig3P97386 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.22□□□□□ -0.45
Lig3P97386 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.22□□□□□ -0.45
Lig3P97386 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.22□□□□□ -0.45
Lig3P97386 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lig3P97386 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Gm23912-201ENSMUST00000104687 87 ntBASIC12.22□□□□□ -0.45
Lig3P97386 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.22□□□□□ -0.45
Lig3P97386 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Lig3P97386 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.22□□□□□ -0.45
Lig3P97386 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.22□□□□□ -0.45
Lig3P97386 Gm4310-201ENSMUST00000177847 889 ntBASIC12.22□□□□□ -0.45
Lig3P97386 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lig3P97386 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.22□□□□□ -0.45
Lig3P97386 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.22□□□□□ -0.45
Lig3P97386 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lig3P97386 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lig3P97386 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.22□□□□□ -0.45
Lig3P97386 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lig3P97386 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.22□□□□□ -0.45
Lig3P97386 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.21□□□□□ -0.45
Lig3P97386 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Lig3P97386 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Lig3P97386 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lig3P97386 Gm13351-201ENSMUST00000118087 414 ntBASIC12.21□□□□□ -0.45
Lig3P97386 Gm15004-201ENSMUST00000119192 630 ntBASIC12.21□□□□□ -0.45
Lig3P97386 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.21□□□□□ -0.45
Lig3P97386 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lig3P97386 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Gm3150-201ENSMUST00000166418 204 ntBASIC12.21□□□□□ -0.45
Lig3P97386 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Lig3P97386 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Lig3P97386 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Lig3P97386 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.21□□□□□ -0.45
Lig3P97386 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.21□□□□□ -0.45
Lig3P97386 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.21□□□□□ -0.45
Lig3P97386 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.21□□□□□ -0.45
Lig3P97386 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lig3P97386 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lig3P97386 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Lig3P97386 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lig3P97386 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.21□□□□□ -0.46
Lig3P97386 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lig3P97386 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Lig3P97386 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Lig3P97386 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lig3P97386 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Lig3P97386 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lig3P97386 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Lig3P97386 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lig3P97386 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lig3P97386 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lig3P97386 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Lig3P97386 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Lig3P97386 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lig3P97386 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lig3P97386 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms