Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm2383-201ENSMUST00000181461 807 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm37284-201ENSMUST00000193607 539 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm8574-201ENSMUST00000203207 924 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm2517-201ENSMUST00000215651 348 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 AC123619.1-203ENSMUST00000225276 2757 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm28581-201ENSMUST00000186086 2177 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm8111-201ENSMUST00000117659 987 ntBASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm43186-201ENSMUST00000198130 824 ntBASIC12.29□□□□□ -0.44
Hmgb1P63158 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm7848-201ENSMUST00000210739 718 ntBASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.29□□□□□ -0.44
Hmgb1P63158 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.29□□□□□ -0.44
Hmgb1P63158 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.29□□□□□ -0.44
Hmgb1P63158 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.29□□□□□ -0.44
Hmgb1P63158 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgb1P63158 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hmgb1P63158 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm12218-201ENSMUST00000117666 399 ntBASIC12.28□□□□□ -0.44
Hmgb1P63158 Gm8302-201ENSMUST00000119217 852 ntBASIC12.28□□□□□ -0.44
Hmgb1P63158 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms