Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lsm6P62313 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.78□□□□□ -0.84
Lsm6P62313 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.78□□□□□ -0.84
Lsm6P62313 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 Gm4917-201ENSMUST00000121452 650 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 Gm10051-201ENSMUST00000145209 414 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm6P62313 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Mir8115-201ENSMUST00000184992 119 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 Gm3551-201ENSMUST00000190750 664 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm6P62313 Gm9111-201ENSMUST00000219394 709 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lsm6P62313 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm6P62313 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.78□□□□□ -0.84
Lsm6P62313 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lsm6P62313 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm6P62313 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm6P62313 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm6P62313 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.77□□□□□ -0.84
Lsm6P62313 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm6P62313 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm6P62313 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm6P62313 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm6P62313 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC9.77□□□□□ -0.84
Lsm6P62313 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.77□□□□□ -0.84
Lsm6P62313 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
Lsm6P62313 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm6P62313 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
Lsm6P62313 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm6P62313 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Lsm6P62313 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Lsm6P62313 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Lsm6P62313 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.77□□□□□ -0.85
Lsm6P62313 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.77□□□□□ -0.85
Lsm6P62313 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.77□□□□□ -0.85
Lsm6P62313 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.77□□□□□ -0.85
Lsm6P62313 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.77□□□□□ -0.85
Lsm6P62313 Gm15573-201ENSMUST00000119487 540 ntBASIC9.77□□□□□ -0.85
Lsm6P62313 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.77□□□□□ -0.85
Lsm6P62313 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Lsm6P62313 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Gm43916-201ENSMUST00000205062 967 ntBASIC9.77□□□□□ -0.85
Lsm6P62313 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.77□□□□□ -0.85
Lsm6P62313 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Gm25125-201ENSMUST00000083340 136 ntBASIC9.77□□□□□ -0.85
Lsm6P62313 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lsm6P62313 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Lsm6P62313 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm6P62313 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Lsm6P62313 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms