Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.02□□□□□ -0.8
Lsm3P62311 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.02□□□□□ -0.8
Lsm3P62311 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.02□□□□□ -0.8
Lsm3P62311 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC10.02□□□□□ -0.8
Lsm3P62311 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.02□□□□□ -0.8
Lsm3P62311 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC10.02□□□□□ -0.8
Lsm3P62311 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Lsm3P62311 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm3P62311 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm3P62311 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Lsm3P62311 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Gm14928-201ENSMUST00000120198 477 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Lsm3P62311 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.02□□□□□ -0.81
Lsm3P62311 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.02□□□□□ -0.81
Lsm3P62311 Gm16379-201ENSMUST00000161469 348 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Gm20495-201ENSMUST00000173902 235 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.02□□□□□ -0.81
Lsm3P62311 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Gm8762-201ENSMUST00000193486 339 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Gm43118-201ENSMUST00000199149 775 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.02□□□□□ -0.81
Lsm3P62311 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.02□□□□□ -0.81
Lsm3P62311 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC10.02□□□□□ -0.81
Lsm3P62311 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Lsm3P62311 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.02□□□□□ -0.81
Lsm3P62311 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm3P62311 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Lsm3P62311 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Lsm3P62311 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.01□□□□□ -0.81
Lsm3P62311 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.01□□□□□ -0.81
Lsm3P62311 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.01□□□□□ -0.81
Lsm3P62311 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Btrc-206ENSMUST00000224102 3037 ntBASIC10.01□□□□□ -0.81
Lsm3P62311 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Lsm3P62311 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Lsm3P62311 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Gm11511-201ENSMUST00000118146 540 ntBASIC10.01□□□□□ -0.81
Lsm3P62311 Gm11660-201ENSMUST00000120955 412 ntBASIC10.01□□□□□ -0.81
Lsm3P62311 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Lsm3P62311 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Gm9230-201ENSMUST00000188228 532 ntBASIC10.01□□□□□ -0.81
Lsm3P62311 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.01□□□□□ -0.81
Lsm3P62311 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.01□□□□□ -0.81
Lsm3P62311 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Lsm3P62311 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm3P62311 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms