Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Rfx3P48381 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rfx3P48381 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.05□□□□□ -0.8
Rfx3P48381 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Rfx3P48381 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Rfx3P48381 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Gm7851-201ENSMUST00000117574 323 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 Gm12247-201ENSMUST00000117585 670 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 Gm13809-201ENSMUST00000117921 597 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.05□□□□□ -0.8
Rfx3P48381 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Gm3150-201ENSMUST00000166418 204 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Rfx3P48381 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.05□□□□□ -0.8
Rfx3P48381 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.05□□□□□ -0.8
Rfx3P48381 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Rfx3P48381 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Rfx3P48381 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.05□□□□□ -0.8
Rfx3P48381 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rfx3P48381 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rfx3P48381 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.05□□□□□ -0.8
Rfx3P48381 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Rfx3P48381 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm8731-201ENSMUST00000118088 412 ntBASIC10.04□□□□□ -0.8
Rfx3P48381 Gm11941-201ENSMUST00000119904 610 ntBASIC10.04□□□□□ -0.8
Rfx3P48381 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.04□□□□□ -0.8
Rfx3P48381 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.04□□□□□ -0.8
Rfx3P48381 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm43378-201ENSMUST00000199336 582 ntBASIC10.04□□□□□ -0.8
Rfx3P48381 Gm8342-201ENSMUST00000209839 757 ntBASIC10.04□□□□□ -0.8
Rfx3P48381 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.04□□□□□ -0.8
Rfx3P48381 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm6722-201ENSMUST00000221586 390 ntBASIC10.04□□□□□ -0.8
Rfx3P48381 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Rfx3P48381 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Rfx3P48381 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rfx3P48381 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms