Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Spata33-207ENSMUST00000212760 4074 ntBASIC13.24□□□□□ -0.29
Rfx1P48377 AC122382.1-201ENSMUST00000225869 2371 ntBASIC13.24□□□□□ -0.29
Rfx1P48377 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.24□□□□□ -0.29
Rfx1P48377 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.24□□□□□ -0.29
Rfx1P48377 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rfx1P48377 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm12247-201ENSMUST00000117585 670 ntBASIC13.24□□□□□ -0.29
Rfx1P48377 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm7504-201ENSMUST00000201449 424 ntBASIC13.24□□□□□ -0.29
Rfx1P48377 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC13.24□□□□□ -0.29
Rfx1P48377 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rfx1P48377 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Rfx1P48377 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rfx1P48377 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rfx1P48377 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.24□□□□□ -0.29
Rfx1P48377 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx1P48377 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx1P48377 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC13.23□□□□□ -0.29
Rfx1P48377 Gm44826-201ENSMUST00000207648 2332 ntBASIC13.23□□□□□ -0.29
Rfx1P48377 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx1P48377 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Rfx1P48377 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx1P48377 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.23□□□□□ -0.29
Rfx1P48377 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Rfx1P48377 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx1P48377 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx1P48377 Gm17376-201ENSMUST00000166016 84 ntBASIC13.23□□□□□ -0.29
Rfx1P48377 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rfx1P48377 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rfx1P48377 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.23□□□□□ -0.29
Rfx1P48377 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx1P48377 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx1P48377 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rfx1P48377 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.23□□□□□ -0.29
Rfx1P48377 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.23□□□□□ -0.29
Rfx1P48377 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx1P48377 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx1P48377 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC13.23□□□□□ -0.29
Rfx1P48377 Gm44103-201ENSMUST00000204364 3662 ntBASIC13.23□□□□□ -0.29
Rfx1P48377 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Gm43999-201ENSMUST00000204286 2889 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rfx1P48377 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rfx1P48377 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rfx1P48377 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Gm15549-201ENSMUST00000121595 622 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.22□□□□□ -0.29
Rfx1P48377 Gm22846-201ENSMUST00000157706 270 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx1P48377 Gm18734-201ENSMUST00000172937 808 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rfx1P48377 Gm16505-201ENSMUST00000179981 232 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Gm8502-201ENSMUST00000185708 901 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Gm21147-201ENSMUST00000186046 913 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Gm8510-201ENSMUST00000189202 895 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Gm2316-201ENSMUST00000190613 921 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Gm37597-201ENSMUST00000191853 382 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Gm44364-201ENSMUST00000198368 141 ntBASIC13.22□□□□□ -0.29
Rfx1P48377 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rfx1P48377 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms