Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Msh2P43247 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
Msh2P43247 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.46□□□□□ -0.57
Msh2P43247 Gm8731-201ENSMUST00000118088 412 ntBASIC11.46□□□□□ -0.57
Msh2P43247 Gm11331-201ENSMUST00000119764 288 ntBASIC11.46□□□□□ -0.57
Msh2P43247 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.46□□□□□ -0.57
Msh2P43247 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.46□□□□□ -0.57
Msh2P43247 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.46□□□□□ -0.57
Msh2P43247 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.46□□□□□ -0.57
Msh2P43247 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.46□□□□□ -0.57
Msh2P43247 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.46□□□□□ -0.57
Msh2P43247 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.46□□□□□ -0.57
Msh2P43247 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.46□□□□□ -0.57
Msh2P43247 Gm32111-201ENSMUST00000207689 846 ntBASIC11.46□□□□□ -0.57
Msh2P43247 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.46□□□□□ -0.57
Msh2P43247 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.46□□□□□ -0.57
Msh2P43247 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Msh2P43247 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Msh2P43247 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.46□□□□□ -0.57
Msh2P43247 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Msh2P43247 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.46□□□□□ -0.58
Msh2P43247 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Msh2P43247 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.46□□□□□ -0.58
Msh2P43247 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Msh2P43247 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Msh2P43247 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Msh2P43247 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.45□□□□□ -0.58
Msh2P43247 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Msh2P43247 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Msh2P43247 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.45□□□□□ -0.58
Msh2P43247 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Msh2P43247 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.45□□□□□ -0.58
Msh2P43247 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.45□□□□□ -0.58
Msh2P43247 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Msh2P43247 Gm20426-201ENSMUST00000173657 440 ntBASIC11.45□□□□□ -0.58
Msh2P43247 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.45□□□□□ -0.58
Msh2P43247 Gm10774-201ENSMUST00000188689 204 ntBASIC11.45□□□□□ -0.58
Msh2P43247 Gm37835-201ENSMUST00000193305 361 ntBASIC11.45□□□□□ -0.58
Msh2P43247 Gm37301-201ENSMUST00000195412 568 ntBASIC11.45□□□□□ -0.58
Msh2P43247 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.45□□□□□ -0.58
Msh2P43247 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.45□□□□□ -0.58
Msh2P43247 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Msh2P43247 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.45□□□□□ -0.58
Msh2P43247 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Msh2P43247 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Msh2P43247 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Msh2P43247 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Msh2P43247 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Msh2P43247 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Msh2P43247 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Msh2P43247 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Msh2P43247 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.44□□□□□ -0.58
Msh2P43247 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Msh2P43247 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms