Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.59□□□□□ -0.71
Cdx2P43241 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.59□□□□□ -0.71
Cdx2P43241 Gm43564-201ENSMUST00000196185 211 ntBASIC10.59□□□□□ -0.71
Cdx2P43241 Gm43002-201ENSMUST00000200310 155 ntBASIC10.59□□□□□ -0.71
Cdx2P43241 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Wbp1-209ENSMUST00000205023 716 ntBASIC10.59□□□□□ -0.71
Cdx2P43241 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.59□□□□□ -0.71
Cdx2P43241 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Cdx2P43241 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.59□□□□□ -0.71
Cdx2P43241 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cdx2P43241 n-R5s71-201ENSMUST00000093668 119 ntBASIC10.59□□□□□ -0.71
Cdx2P43241 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Cdx2P43241 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
Cdx2P43241 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cdx2P43241 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cdx2P43241 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Cdx2P43241 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdx2P43241 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdx2P43241 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cdx2P43241 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdx2P43241 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
Cdx2P43241 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cdx2P43241 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Btrc-209ENSMUST00000224478 2194 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cdx2P43241 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdx2P43241 Gm15707-201ENSMUST00000118804 996 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Gm25288-201ENSMUST00000122800 265 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.58□□□□□ -0.72
Cdx2P43241 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Gm24078-201ENSMUST00000158184 103 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Cdx2P43241 Gm7765-201ENSMUST00000182585 974 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Gm7572-201ENSMUST00000182616 766 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdx2P43241 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdx2P43241 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdx2P43241 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Cdx2P43241 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdx2P43241 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.58□□□□□ -0.72
Cdx2P43241 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms