Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hoxc11P31313 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm15528-201ENSMUST00000117821 864 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm23218-201ENSMUST00000158124 276 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm21778-201ENSMUST00000178779 471 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxc11P31313 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm43380-201ENSMUST00000200421 220 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hoxc11P31313 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.82□□□□□ -0.68
Hoxc11P31313 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc11P31313 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxc11P31313 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Hoxc11P31313 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hoxc11P31313 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hoxc11P31313 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.81□□□□□ -0.68
Hoxc11P31313 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Hoxc11P31313 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hoxc11P31313 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc11P31313 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms