Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.17□□□□□ -0.78
Nedd8P29595 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Gm20495-201ENSMUST00000173902 235 ntBASIC10.17□□□□□ -0.78
Nedd8P29595 Gm9230-201ENSMUST00000188228 532 ntBASIC10.17□□□□□ -0.78
Nedd8P29595 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Gm8515-201ENSMUST00000194852 576 ntBASIC10.17□□□□□ -0.78
Nedd8P29595 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.17□□□□□ -0.78
Nedd8P29595 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.17□□□□□ -0.78
Nedd8P29595 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.17□□□□□ -0.78
Nedd8P29595 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 AC131029.1-201ENSMUST00000226391 2929 ntBASIC10.17□□□□□ -0.78
Nedd8P29595 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nedd8P29595 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nedd8P29595 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC10.17□□□□□ -0.78
Nedd8P29595 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC10.17□□□□□ -0.78
Nedd8P29595 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nedd8P29595 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nedd8P29595 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Gm11941-201ENSMUST00000119904 610 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Gm7150-201ENSMUST00000122032 981 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nedd8P29595 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm23984-201ENSMUST00000157139 203 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm27839-201ENSMUST00000184242 106 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.16□□□□□ -0.78
Nedd8P29595 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm7561-201ENSMUST00000211203 886 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm7103-201ENSMUST00000195642 1852 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Nedd8P29595 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.16□□□□□ -0.78
Nedd8P29595 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.16□□□□□ -0.78
Nedd8P29595 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC10.16□□□□□ -0.78
Nedd8P29595 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nedd8P29595 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nedd8P29595 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC10.16□□□□□ -0.78
Nedd8P29595 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC10.15□□□□□ -0.78
Nedd8P29595 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.15□□□□□ -0.78
Nedd8P29595 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Nedd8P29595 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Cdh18-207ENSMUST00000226693 2165 ntBASIC10.15□□□□□ -0.78
Nedd8P29595 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC10.15□□□□□ -0.78
Nedd8P29595 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.15□□□□□ -0.78
Nedd8P29595 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Nedd8P29595 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.15□□□□□ -0.78
Nedd8P29595 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nedd8P29595 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nedd8P29595 Gm16379-201ENSMUST00000161469 348 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms