Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.47□□□□□ -0.57
Nfkb1P25799 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Gm13445-201ENSMUST00000121664 307 ntBASIC11.47□□□□□ -0.57
Nfkb1P25799 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.47□□□□□ -0.57
Nfkb1P25799 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Gm43912-201ENSMUST00000204352 538 ntBASIC11.47□□□□□ -0.57
Nfkb1P25799 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.47□□□□□ -0.57
Nfkb1P25799 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.47□□□□□ -0.57
Nfkb1P25799 Gm10020-201ENSMUST00000081993 612 ntBASIC11.47□□□□□ -0.57
Nfkb1P25799 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nfkb1P25799 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nfkb1P25799 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nfkb1P25799 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.46□□□□□ -0.57
Nfkb1P25799 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nfkb1P25799 Mir1905-201ENSMUST00000122779 82 ntBASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm25830-201ENSMUST00000158923 132 ntBASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm26976-201ENSMUST00000182929 908 ntBASIC11.46□□□□□ -0.57
Nfkb1P25799 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm7593-201ENSMUST00000187246 644 ntBASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm37365-201ENSMUST00000193109 409 ntBASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm44814-201ENSMUST00000207018 434 ntBASIC11.46□□□□□ -0.57
Nfkb1P25799 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nfkb1P25799 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm9102-201ENSMUST00000219250 465 ntBASIC11.46□□□□□ -0.57
Nfkb1P25799 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.46□□□□□ -0.57
Nfkb1P25799 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.46□□□□□ -0.57
Nfkb1P25799 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nfkb1P25799 Gm25201-201ENSMUST00000083093 170 ntBASIC11.46□□□□□ -0.57
Nfkb1P25799 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nfkb1P25799 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nfkb1P25799 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Nfkb1P25799 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nfkb1P25799 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nfkb1P25799 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.46□□□□□ -0.58
Nfkb1P25799 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nfkb1P25799 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nfkb1P25799 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nfkb1P25799 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.45□□□□□ -0.58
Nfkb1P25799 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.45□□□□□ -0.58
Nfkb1P25799 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nfkb1P25799 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.45□□□□□ -0.58
Nfkb1P25799 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.45□□□□□ -0.58
Nfkb1P25799 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.45□□□□□ -0.58
Nfkb1P25799 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nfkb1P25799 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Nfkb1P25799 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nfkb1P25799 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms