Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm43118-201ENSMUST00000199149 775 ntBASIC11.2□□□□□ -0.62
VimP20152 Gm6745-201ENSMUST00000199216 526 ntBASIC11.2□□□□□ -0.62
VimP20152 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
VimP20152 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
VimP20152 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.2□□□□□ -0.62
VimP20152 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC11.2□□□□□ -0.62
VimP20152 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VimP20152 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.19□□□□□ -0.62
VimP20152 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.19□□□□□ -0.62
VimP20152 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC11.19□□□□□ -0.62
VimP20152 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.19□□□□□ -0.62
VimP20152 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.19□□□□□ -0.62
VimP20152 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.19□□□□□ -0.62
VimP20152 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.19□□□□□ -0.62
VimP20152 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.19□□□□□ -0.62
VimP20152 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.19□□□□□ -0.62
VimP20152 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.19□□□□□ -0.62
VimP20152 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.19□□□□□ -0.62
VimP20152 Gm40466-201ENSMUST00000212174 422 ntBASIC11.19□□□□□ -0.62
VimP20152 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.19□□□□□ -0.62
VimP20152 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.19□□□□□ -0.62
VimP20152 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.19□□□□□ -0.62
VimP20152 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.19□□□□□ -0.62
VimP20152 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
VimP20152 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VimP20152 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC11.19□□□□□ -0.62
VimP20152 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.18□□□□□ -0.62
VimP20152 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VimP20152 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VimP20152 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Gm45597-201ENSMUST00000211524 1994 ntBASIC11.18□□□□□ -0.62
VimP20152 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.18□□□□□ -0.62
VimP20152 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.18□□□□□ -0.62
VimP20152 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Gm11930-201ENSMUST00000117788 190 ntBASIC11.18□□□□□ -0.62
VimP20152 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.18□□□□□ -0.62
VimP20152 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VimP20152 Gm7150-201ENSMUST00000122032 981 ntBASIC11.18□□□□□ -0.62
VimP20152 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VimP20152 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.18□□□□□ -0.62
VimP20152 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
VimP20152 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.18□□□□□ -0.62
VimP20152 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.18□□□□□ -0.62
VimP20152 Gm27441-201ENSMUST00000185000 105 ntBASIC11.18□□□□□ -0.62
VimP20152 Gm29127-201ENSMUST00000188304 517 ntBASIC11.18□□□□□ -0.62
VimP20152 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.18□□□□□ -0.62
VimP20152 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.18□□□□□ -0.62
VimP20152 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Gm5950-201ENSMUST00000213337 772 ntBASIC11.18□□□□□ -0.62
VimP20152 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.18□□□□□ -0.62
VimP20152 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.18□□□□□ -0.62
VimP20152 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.18□□□□□ -0.62
VimP20152 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VimP20152 Gm5455-201ENSMUST00000058710 715 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms