Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ly6c1P0CW02 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Ly6c1P0CW02 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Cenpk-202ENSMUST00000070761 1306 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Mir669p-2-201ENSMUST00000103868 87 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Mir669p-1-201ENSMUST00000103884 87 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm11485-201ENSMUST00000120048 1175 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm3329-201ENSMUST00000159873 556 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm27910-201ENSMUST00000185004 107 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm29640-201ENSMUST00000187972 278 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm33571-201ENSMUST00000193271 657 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm44980-201ENSMUST00000205826 314 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm45636-201ENSMUST00000210497 1064 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm10254-201ENSMUST00000052888 867 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm10179-201ENSMUST00000086233 688 ntBASIC9.58□□□□□ -0.88
Ly6c1P0CW02 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ly6c1P0CW02 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ly6c1P0CW02 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms