Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm11930-201ENSMUST00000117788 190 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm7150-201ENSMUST00000122032 981 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm29543-201ENSMUST00000188138 967 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm6450-201ENSMUST00000200896 574 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm42867-201ENSMUST00000202995 469 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm8956-201ENSMUST00000203939 825 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm7287-201ENSMUST00000205267 602 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm44741-201ENSMUST00000207503 2127 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 AC154252.2-201ENSMUST00000223593 767 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm25125-201ENSMUST00000083340 136 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC7.56□□□□□ -1.2
Smim1P0C8K7 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smim1P0C8K7 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Smim1P0C8K7 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Dync1i1-201ENSMUST00000115554 2518 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Syt7-204ENSMUST00000223586 1344 ntBASIC7.55□□□□□ -1.2
Smim1P0C8K7 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Smim1P0C8K7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms