Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Igh-VJ558P01758 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm6485-201ENSMUST00000160676 439 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm26461-201ENSMUST00000175064 290 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Mir6979-201ENSMUST00000183927 56 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 AC166992.1-201ENSMUST00000216356 565 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 AC165260.2-203ENSMUST00000224237 336 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Igh-VJ558P01758 Gm9333-201ENSMUST00000205452 1323 ntBASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.57□□□□□ -0.88
Igh-VJ558P01758 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.57□□□□□ -0.88
Igh-VJ558P01758 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms