Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc180J3QNE4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc180J3QNE4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Gm11473-201ENSMUST00000118980 359 ntBASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Gm9515-201ENSMUST00000200276 647 ntBASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Gm5278-201ENSMUST00000055957 552 ntBASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Gm43482-201ENSMUST00000202797 1861 ntBASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc180J3QNE4 Gm13857-201ENSMUST00000139645 173 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm5274-201ENSMUST00000182641 1003 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm43726-201ENSMUST00000199110 775 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm18122-201ENSMUST00000211390 904 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm5513-201ENSMUST00000072982 1218 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm11544-201ENSMUST00000120215 382 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm15815-201ENSMUST00000120569 255 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm6425-201ENSMUST00000136332 790 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm25394-201ENSMUST00000157338 133 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm7833-201ENSMUST00000183288 990 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 AC154436.1-201ENSMUST00000227272 782 ntBASIC20■□□□□ 0.79
Ccdc180J3QNE4 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC20■□□□□ 0.79
Ccdc180J3QNE4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Gm13120-201ENSMUST00000117343 1446 ntBASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Gm13104-201ENSMUST00000119651 1446 ntBASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Gm14231-201ENSMUST00000120090 592 ntBASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Gm45310-201ENSMUST00000210436 275 ntBASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 AC133496.1-201ENSMUST00000223891 743 ntBASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc180J3QNE4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Gm12337-201ENSMUST00000119634 400 ntBASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Gm42588-201ENSMUST00000200538 1297 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms