Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Mir6934-201ENSMUST00000183965 62 ntBASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Gm4430-202ENSMUST00000193902 1041 ntBASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Gm45308-201ENSMUST00000210610 415 ntBASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 AC163646.3-202ENSMUST00000228685 691 ntBASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm5174-201ENSMUST00000171131 1423 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 AC154640.1-203ENSMUST00000228316 1618 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm23062-201ENSMUST00000102349 110 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm15626-201ENSMUST00000117478 868 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm23432-201ENSMUST00000157181 131 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm5766-202ENSMUST00000161633 799 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm18182-201ENSMUST00000191380 1251 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm37009-201ENSMUST00000193297 361 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm40332-201ENSMUST00000199847 938 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm6783-201ENSMUST00000120916 1437 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Col4a6B1AVK5 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Gm15793-201ENSMUST00000121857 495 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Gm5501-201ENSMUST00000165917 832 ntBASIC11.21□□□□□ -0.61
Col4a6B1AVK5 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms