Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm45745-201ENSMUST00000211447 1180 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Mir1249-201ENSMUST00000116791 98 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Gm5526-201ENSMUST00000153604 423 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Gm24312-201ENSMUST00000178677 119 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Gm26782-203ENSMUST00000227103 751 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn3aA2ASI5 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm6441-201ENSMUST00000120983 696 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm26368-201ENSMUST00000157826 118 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm5808-201ENSMUST00000178090 357 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm5801-201ENSMUST00000182247 780 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm44640-201ENSMUST00000206894 247 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Mir291b-201ENSMUST00000104838 79 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm25872-201ENSMUST00000177784 100 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Scn3aA2ASI5 Gm6564-201ENSMUST00000075377 619 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms