Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm15528-201ENSMUST00000117821 864 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm22846-201ENSMUST00000157706 270 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm8365-201ENSMUST00000197334 648 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm43058-201ENSMUST00000197645 625 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm44323-201ENSMUST00000198689 129 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm18561-201ENSMUST00000206027 804 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Gm10263-201ENSMUST00000085163 300 ntBASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2aQ9DB34 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm12463-201ENSMUST00000118271 849 ntBASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm13182-201ENSMUST00000122241 312 ntBASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm24398-201ENSMUST00000157870 109 ntBASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2aQ9DB34 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms