Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gm13226-201ENSMUST00000117838 404 ntBASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gm22846-201ENSMUST00000157706 270 ntBASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Gm45797-201ENSMUST00000212759 1921 ntBASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps33aQ9D2N9 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm26670-201ENSMUST00000180429 3287 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm14644-201ENSMUST00000116671 647 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm11989-201ENSMUST00000117240 672 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm11801-201ENSMUST00000117807 746 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm6023-201ENSMUST00000118217 606 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm11362-201ENSMUST00000118838 850 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm14660-201ENSMUST00000119809 575 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Mir1982-201ENSMUST00000157368 74 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm25125-201ENSMUST00000083340 136 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Vps33aQ9D2N9 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Vps33aQ9D2N9 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps33aQ9D2N9 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps33aQ9D2N9 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps33aQ9D2N9 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms