Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm13350-201ENSMUST00000120519 479 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm7584-201ENSMUST00000175829 940 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm37259-201ENSMUST00000193903 849 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm19324-201ENSMUST00000213229 1169 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm9797-202ENSMUST00000218003 294 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 AC140209.1-201ENSMUST00000227875 284 ntBASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim13Q9CYB0 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.3□□□□□ -0.76
Trim13Q9CYB0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.3□□□□□ -0.76
Trim13Q9CYB0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim13Q9CYB0 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms