Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Krt88Q9CPR6 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Krt88Q9CPR6 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gm13296-201ENSMUST00000117854 997 ntBASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gm13350-201ENSMUST00000120519 479 ntBASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gm25226-201ENSMUST00000158198 123 ntBASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Olfml3-204ENSMUST00000169286 874 ntBASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Krt88Q9CPR6 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm11509-201ENSMUST00000117358 325 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm28686-201ENSMUST00000187404 609 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm6621-201ENSMUST00000193251 772 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm43758-201ENSMUST00000199500 367 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm7783-201ENSMUST00000204795 781 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm45865-201ENSMUST00000211815 945 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm26448-201ENSMUST00000082446 203 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Krt88Q9CPR6 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms