Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 AC156274.1-201ENSMUST00000219193 634 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm11951-201ENSMUST00000116005 431 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm15661-201ENSMUST00000117390 556 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 AC163038.2-201ENSMUST00000224851 650 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 AC140426.1-201ENSMUST00000227933 459 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Gm6457-201ENSMUST00000066378 815 ntBASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh23Q99PF4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Gm2716-201ENSMUST00000212350 643 ntBASIC10.96□□□□□ -0.65
Cdh23Q99PF4 AC156561.1-201ENSMUST00000224774 233 ntBASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh23Q99PF4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.96□□□□□ -0.66
Cdh23Q99PF4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 AA474408-201ENSMUST00000098110 3339 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm44167-201ENSMUST00000204957 1878 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms