Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm23647-201ENSMUST00000175042 109 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Rn5s-201ENSMUST00000177555 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s108-201ENSMUST00000177575 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s121-201ENSMUST00000177589 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s146-201ENSMUST00000177889 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm22109-201ENSMUST00000177995 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm22291-201ENSMUST00000178027 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s141-201ENSMUST00000178066 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm23284-201ENSMUST00000178069 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s100-201ENSMUST00000178106 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s111-201ENSMUST00000178203 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s105-201ENSMUST00000178499 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s149-201ENSMUST00000178520 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s103-201ENSMUST00000178755 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s123-201ENSMUST00000178804 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm25018-201ENSMUST00000179081 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm25212-201ENSMUST00000179432 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm26391-201ENSMUST00000179843 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm37207-201ENSMUST00000194284 296 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 AC159246.1-201ENSMUST00000214478 249 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 AC164087.2-201ENSMUST00000216206 1072 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm26782-203ENSMUST00000227103 751 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm24089-201ENSMUST00000093696 109 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-1Q99MA9 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms