Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Gm17936-201ENSMUST00000199413 988 ntBASIC13.75□□□□□ -0.21
RtcbQ99LF4 Gm42689-201ENSMUST00000202403 404 ntBASIC13.75□□□□□ -0.21
RtcbQ99LF4 Gm43866-201ENSMUST00000203894 839 ntBASIC13.75□□□□□ -0.21
RtcbQ99LF4 Gm45893-201ENSMUST00000211899 247 ntBASIC13.75□□□□□ -0.21
RtcbQ99LF4 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
RtcbQ99LF4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Gm13426-201ENSMUST00000117887 795 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Gm16441-201ENSMUST00000138176 924 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 Gm6038-201ENSMUST00000154310 948 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 AC140314.1-201ENSMUST00000219549 554 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 AC118639.1-202ENSMUST00000226957 653 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 CT010505.2-201ENSMUST00000227918 998 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RtcbQ99LF4 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.74□□□□□ -0.21
RtcbQ99LF4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Gm8873-201ENSMUST00000217847 1439 ntBASIC13.73□□□□□ -0.21
RtcbQ99LF4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.73□□□□□ -0.21
RtcbQ99LF4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RtcbQ99LF4 Gm11919-201ENSMUST00000117609 721 ntBASIC13.73□□□□□ -0.21
RtcbQ99LF4 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms